C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: small nuclear ribonucleoprotein polypeptide C pseudogene 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000492453 SNRPCP11-001 ENSG00000241346 9606 - 3:125816082-125816286 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLiverENST00000492453
Transcript ID Breast Liver
ENST00000492453 0.692±0.00 6.793±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000119900 Gm12993-001 processed_pseudogene Mus_musculus 0 195
ENSMUST00000071006 Snrpc-001 protein_coding Mus_musculus 0 189
ENSMUST00000173338 Gm2991-001 processed_pseudogene Mus_musculus 4.2039e-45 183
ENSMUST00000058951 Gm8849-201 pseudogene Mus_musculus 9.80909e-45 182
ENSMUST00000175770 Gm8974-001 processed_pseudogene Mus_musculus 2.00386e-43 178
ENSMUST00000120526 Gm15197-001 processed_pseudogene Mus_musculus 2.00386e-43 178
ENSMUST00000137581 Snrpc-002 retained_intron Mus_musculus 7e-23 110

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