C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: cleavage and polyadenylation specific factor 3-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000462432 CPSF3L-005 ENSG00000127054 9606 - 1:1311602-1317450 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalENST00000462432
Transcript ID Adrenal
ENST00000462432 16.084±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00059X CIL_00059X_0002 CGP 1:1292376-1311677
CIL_0001ML CIL_0001ML_0002 CGP 1:1311585-1328897

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030901 Cpsf3l-001 protein_coding Mus_musculus 0 1168
ENSMUST00000120794 Cpsf3l-004 protein_coding Mus_musculus 0 1064
ENSMUST00000134678 Cpsf3l-005 processed_transcript Mus_musculus 0 828
ENSMUST00000156460 Cpsf3l-003 nonsense_mediated_decay Mus_musculus 0 566
ENSMUST00000181377 Slc35a5-004 retained_intron Mus_musculus 0.0000000005 71
ENSMUST00000127431 Cpne7-004 retained_intron Mus_musculus 0.000004 58
ENSMUST00000153820 Pml-003 protein_coding Mus_musculus 0.000004 58
ENSMUST00000035519 Otud7b-201 protein_coding Mus_musculus 0.00005 55
ENSMUST00000098849 Otud7b-002 protein_coding Mus_musculus 0.00005 55
ENSMUST00000090785 Otud7b-001 protein_coding Mus_musculus 0.00005 55
ENSMUST00000187548 Dnah7b-006 retained_intron Mus_musculus 0.00005 55
ENSMUST00000141278 Lypla1-004 retained_intron Mus_musculus 0.0002 53

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