C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 14277
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121195 Gm14277-001 ENSMUSG00000084113 10090 + 2:157168820-157169179 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartLiverOvaryPlacentaTestisENSMUST00000121195
Transcript ID Bladder Brain Breast Heart Liver Ovary Placenta Testis
ENSMUST00000121195 0.091±0.01 0.155±0.05 0.450±0.00 0.161±0.00 0.341±0.15 0.166±0.05 0.176±0.07 0.741±0.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004ZW CIL_0004ZW_0002 CGP 2:157097533-157204534
CIL_0004XV CIL_0004XV_0002 CGP 2:157145893-157279549

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000300413 SNRPD1-001 protein_coding Homo_sapiens 0 532
ENST00000402743 RP11-570P14.1-001 processed_pseudogene Homo_sapiens 0 510
ENST00000549647 RP11-248E9.7-001 processed_pseudogene Homo_sapiens 0 340
ENST00000579618 SNRPD1-003 protein_coding Homo_sapiens 2e-35 152
ENST00000582475 SNRPD1-002 protein_coding Homo_sapiens 0 385

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