C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: collagen, type XII, alpha 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121227 Col12a1-002 ENSMUSG00000032332 10090 - 9:79601759-79718720 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENSMUST00000121227
Transcript ID Liver
ENSMUST00000121227 0.055±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00061X CIL_00061X_0003 CGP 9:78615546-79718831
CIL_000624 CIL_000624_0004 CGP 9:79598991-79759853

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000322507 COL12A1-001 protein_coding Homo_sapiens 0 10740
ENST00000345356 COL12A1-002 protein_coding Homo_sapiens 0 6671
ENST00000416123 COL12A1-009 protein_coding Homo_sapiens 0 9158
ENST00000419671 COL12A1-007 protein_coding Homo_sapiens 0 1555
ENST00000425443 COL12A1-008 protein_coding Homo_sapiens 0 2667
ENST00000474564 COL12A1-005 retained_intron Homo_sapiens 0 440
ENST00000483888 COL12A1-003 protein_coding Homo_sapiens 0 10800
ENST00000486533 COL12A1-004 retained_intron Homo_sapiens 0 1591
ENST00000493109 COL12A1-006 protein_coding Homo_sapiens 0 808
ENST00000511023 COL12A1-010 processed_transcript Homo_sapiens 0 579
ENST00000611354 COL12A1-201 protein_coding Homo_sapiens 0 10740
ENST00000615798 COL12A1-202 protein_coding Homo_sapiens 0 10730

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