C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000456272}
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000483754 RP11-432B6.3-001 ENSG00000248710 9606 - 3:160227454-160449829 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENST00000483754
Transcript ID Brain
ENST00000483754 2.916±0.38

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005813 IBA centrosome
GO:0005929 IBA cilium
GO:0008270 IEA zinc ion binding
GO:0030992 IBA intraciliary transport particle B
GO:0042384 IBA cilium assembly
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000169064 Ift80-202 protein_coding Mus_musculus 0 2278
ENSMUST00000029347 Ift80-201 protein_coding Mus_musculus 0 2278
ENSMUST00000136448 Ift80-002 retained_intron Mus_musculus 0 2278
ENSMUST00000107812 Ift80-001 protein_coding Mus_musculus 0 2278
ENSMUST00000136176 Ift80-004 retained_intron Mus_musculus 0 1184
ENSMUST00000136512 Trim59-002 protein_coding Mus_musculus 0 1072
ENSMUST00000107802 Trim59-001 protein_coding Mus_musculus 0 1072
ENSMUST00000152502 Ift80-003 retained_intron Mus_musculus 0 1031
ENSMUST00000121501 Gm15381-001 processed_pseudogene Mus_musculus 0 891
ENSMUST00000176754 Ift80-009 processed_transcript Mus_musculus 0 448
ENSMUST00000154741 Ift80-006 protein_coding Mus_musculus 0 278

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