C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122160 Uspl1-002 ENSMUSG00000041264 10090 + 5:149184663-149215430 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastKidneyLiverLungOvaryPlacentaTestisENSMUST00000122160
Transcript ID Breast Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000122160 1.226±0.00 1.154±0.50 0.753±0.25 0.915±0.05 1.931±0.69 1.786±0.48 1.405±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UA CIL_0007UA_0002 VISTA 5:149020224-149622595
CIL_0004CF CIL_0004CF_0002 CGP 5:149046702-149215434
CIL_0004CN CIL_0004CN_0003 CGP 5:149184350-149288045

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005615 IEA extracellular space
GO:0006508 IEA proteolysis
GO:0008283 IEA cell proliferation
GO:0015030 IEA Cajal body
GO:0016926 IEA protein desumoylation
GO:0030576 IEA Cajal body organization
GO:0032183 IEA SUMO binding
GO:0070140 IEA SUMO-specific isopeptidase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000255304 USPL1-001 protein_coding Homo_sapiens 0 826
ENST00000614860 USPL1-003 protein_coding Homo_sapiens 0 756

Loading