C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: methyl-CpG binding domain protein 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122816 Mbd4-003 ENSMUSG00000030322 10090 - 6:115847913-115853288 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaENSMUST00000122816
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta
ENSMUST00000122816 0.242±0.05 1.012±0.00 0.581±0.17 0.074±0.00 0.296±0.00 0.355±0.13 1.271±1.09 0.190±0.08 0.688±0.34 0.859±0.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00030X CIL_00030X_0002 CGP 6:115810729-115853371
CIL_00030Y CIL_00030Y_0002 CGP 6:115840697-115926699

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000249910 MBD4-001 protein_coding Homo_sapiens 0 418
ENST00000429544 MBD4-003 protein_coding Homo_sapiens 0 418
ENST00000503197 MBD4-002 protein_coding Homo_sapiens 0 418
ENST00000507208 MBD4-009 protein_coding Homo_sapiens 0 418
ENST00000509587 MBD4-004 processed_transcript Homo_sapiens 3e-36 156

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