C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear receptor subfamily 1, group H, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000123358 Nr1h2-006 ENSMUSG00000060601 10090 - 7:44550302-44553911 retained_intron

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainLiverMuscleOvaryPlacentaTestisENSMUST00000123358
Transcript ID Adipose Bladder Brain Liver Muscle Ovary Placenta Testis
ENSMUST00000123358 7.474±0.00 8.810±0.83 5.614±0.07 4.530±0.84 3.195±0.00 11.397±2.71 10.976±2.25 0.854±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004IL CIL_0004IL_0002 CGP 7:44549616-44586862

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000253727 NR1H2-001 protein_coding Homo_sapiens 0 1149
ENST00000411902 NR1H2-003 protein_coding Homo_sapiens 0 806
ENST00000593532 NR1H2-010 nonsense_mediated_decay Homo_sapiens 0 470
ENST00000593926 NR1H2-002 protein_coding Homo_sapiens 0 1149
ENST00000597085 NR1H2-013 retained_intron Homo_sapiens 0 640
ENST00000598168 NR1H2-014 protein_coding Homo_sapiens 0 507
ENST00000599105 NR1H2-005 protein_coding Homo_sapiens 0 470

Loading