C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear receptor subfamily 1, group H, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000598168 NR1H2-014 ENSG00000131408 9606 + 19:50376458-50382978 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverOvaryENST00000598168
Transcript ID Brain Heart Kidney Liver Ovary
ENST00000598168 1.091±0.00 0.444±0.00 1.029±0.00 0.958±0.00 0.625±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004IL CIL_0004IL_0001 CGP 19:50329653-50382982

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003707 IEA steroid hormone receptor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0043401 IEA steroid hormone mediated signaling pathway
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000167197 Nr1h2-201 protein_coding Mus_musculus 0 712
ENSMUST00000107910 Nr1h2-003 protein_coding Mus_musculus 0 712
ENSMUST00000107911 Nr1h2-002 protein_coding Mus_musculus 0 712
ENSMUST00000073488 Nr1h2-001 protein_coding Mus_musculus 0 712
ENSMUST00000107912 Nr1h2-004 protein_coding Mus_musculus 0 712
ENSMUST00000123358 Nr1h2-006 retained_intron Mus_musculus 0 507
ENSMUST00000111354 Nr1h3-002 protein_coding Mus_musculus 0 279
ENSMUST00000002177 Nr1h3-001 protein_coding Mus_musculus 0 279
ENSMUST00000111356 Nr1h3-007 protein_coding Mus_musculus 0 279
ENSMUST00000128354 Nr1h2-012 retained_intron Mus_musculus 0 257
ENSMUST00000130031 Nr1h3-005 retained_intron Mus_musculus 0 226
ENSMUST00000111355 Nr1h3-003 protein_coding Mus_musculus 0 226
ENSMUST00000150654 Nr1h3-004 retained_intron Mus_musculus 0 226
ENSMUST00000137674 Nr1h2-011 retained_intron Mus_musculus 3e-21 108
ENSMUST00000132769 Nr1h2-005 retained_intron Mus_musculus 3e-21 108

Loading