C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: RNA pseudouridylate synthase domain containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000124078 Rpusd3-009 ENSMUSG00000051169 10090 - 6:113416789-113419319 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryTestisENSMUST00000124078
Transcript ID Brain Ovary Testis
ENSMUST00000124078 1.102±0.00 2.135±0.51 0.659±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WY CIL_0002WY_0002 CGP 6:113389260-113419348
CIL_00059D CIL_00059D_0002 CGP 6:113415319-113435760

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000383820 RPUSD3-001 protein_coding Homo_sapiens 1e-37 161
ENST00000418713 RPUSD3-011 protein_coding Homo_sapiens 1e-37 161
ENST00000423108 RPUSD3-006 protein_coding Homo_sapiens 8e-38 161
ENST00000424438 RPUSD3-010 protein_coding Homo_sapiens 1e-37 161
ENST00000427174 RPUSD3-009 protein_coding Homo_sapiens 2e-29 134
ENST00000433535 RPUSD3-002 protein_coding Homo_sapiens 1e-37 161
ENST00000464783 RPUSD3-007 retained_intron Homo_sapiens 7e-40 169
ENST00000472381 RPUSD3-012 retained_intron Homo_sapiens 0 320
ENST00000475470 RPUSD3-005 retained_intron Homo_sapiens 5e-29 134
ENST00000484134 RPUSD3-003 retained_intron Homo_sapiens 2e-39 169

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