C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: RNA pseudouridylate synthase domain containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000484134 RPUSD3-003 ENSG00000156990 9606 - 3:9839901-9844016 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartENST00000484134
Transcript ID Colon Heart
ENST00000484134 0.159±0.00 0.107±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WY CIL_0002WY_0001 CGP 3:9808086-9855138
CIL_00059D CIL_00059D_0001 CGP 3:9837849-9880254

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000124078 Rpusd3-009 retained_intron Mus_musculus 2e-39 169
ENSMUST00000147726 Rpusd3-005 protein_coding Mus_musculus 6e-29 134
ENSMUST00000129047 Rpusd3-003 protein_coding Mus_musculus 6e-29 134
ENSMUST00000060634 Rpusd3-002 protein_coding Mus_musculus 6e-29 134
ENSMUST00000113092 Rpusd3-001 protein_coding Mus_musculus 6e-29 134

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