C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00059D_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000156990-ENSG00000187288 CGP 9606 3:9837849-9880254
GeneTranscriptPositionBiotype
ENSG00000156990 (RPUSD3)
RNA pseudouridylate synthase domain containing 3 		ENST00000383820 (RPUSD3-001) 9837849-9844016 protein_coding
ENST00000418713 (RPUSD3-011) 9839941-9844002 protein_coding
ENST00000423108 (RPUSD3-006) 9837849-9840617 protein_coding
ENST00000424438 (RPUSD3-010) 9838020-9843942 protein_coding
ENST00000427174 (RPUSD3-009) 9838165-9843986 protein_coding
ENST00000433535 (RPUSD3-002) 9837849-9844014 protein_coding
ENST00000433555 (RPUSD3-013) 9841408-9843976 protein_coding
ENST00000433972 (RPUSD3-004) 9841257-9844059 protein_coding
ENST00000451405 (RPUSD3-014) 9841698-9843995 nonsense_mediated_decay
ENST00000460909 (RPUSD3-017) 9843151-9844016 retained_intron
ENST00000464783 (RPUSD3-007) 9837882-9840866 retained_intron
ENST00000466141 (RPUSD3-008) 9837894-9839713 retained_intron
ENST00000472381 (RPUSD3-012) 9840682-9844018 retained_intron
ENST00000473522 (RPUSD3-016) 9841854-9843737 processed_transcript
ENST00000475470 (RPUSD3-005) 9839901-9843571 retained_intron
ENST00000484134 (RPUSD3-003) 9839901-9844016 retained_intron
ENST00000485705 (RPUSD3-015) 9841736-9844602 processed_transcript
ENSG00000187288 (CIDEC)
cell death-inducing DFFA-like effector c 		ENST00000336832 (CIDEC-001) 9866714-9879056 protein_coding
ENST00000383817 (CIDEC-201) 9866711-9878812 protein_coding
ENST00000423850 (CIDEC-003) 9866714-9880251 protein_coding
ENST00000430427 (CIDEC-006) 9867029-9878511 protein_coding
ENST00000443115 (CIDEC-004) 9867063-9878488 protein_coding
ENST00000455015 (CIDEC-002) 9866714-9879056 protein_coding
ENST00000487454 (CIDEC-007) 9877883-9880254 retained_intron
ENST00000618572 (CIDEC-202) 9866711-9880254 protein_coding
CIL_00059D_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000051169-ENSMUSG00000030278 CGP 10090 6:113415319-113435760
GeneTranscriptPositionBiotype
ENSMUSG00000030278 (Cidec)
cell death-inducing DFFA-like effector c 		ENSMUST00000032416 (Cidec-002) 113424636-113435756 protein_coding
ENSMUST00000113089 (Cidec-001) 113424634-113435760 protein_coding
ENSMUST00000113091 (Cidec-003) 113425557-113434764 protein_coding
ENSMUST00000133348 (Cidec-004) 113428511-113434613 protein_coding
ENSMUSG00000051169 (Rpusd3)
RNA pseudouridylate synthase domain containing 3 		ENSMUST00000060634 (Rpusd3-002) 113415329-113419319 protein_coding
ENSMUST00000113092 (Rpusd3-001) 113415319-113419348 protein_coding
ENSMUST00000124078 (Rpusd3-009) 113416789-113419319 retained_intron
ENSMUST00000129047 (Rpusd3-003) 113416106-113419319 protein_coding
ENSMUST00000129560 (Rpusd3-008) 113417223-113419331 protein_coding
ENSMUST00000134853 (Rpusd3-006) 113417196-113419048 processed_transcript
ENSMUST00000147726 (Rpusd3-005) 113416310-113419310 protein_coding
ENSMUST00000150452 (Rpusd3-004) 113418304-113419323 retained_intron
ENSMUST00000151618 (Rpusd3-007) 113416894-113419314 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00059D_0001ENSG00000156990ENST00000383820ENST00000418713ENST00000423108ENST00000424438ENST00000427174ENST00000433535ENST00000433555ENST00000433972ENST00000451405ENST00000460909ENST00000464783ENST00000466141ENST00000472381ENST00000473522ENST00000475470ENST00000484134ENST00000485705ENSG00000187288ENST00000336832ENST00000383817ENST00000423850ENST00000430427ENST00000443115ENST00000455015ENST00000487454ENST00000618572CIL_00059D_0002ENSMUSG00000030278ENSMUST00000032416ENSMUST00000113089ENSMUST00000113091ENSMUST00000133348ENSMUSG00000051169ENSMUST00000060634ENSMUST00000113092ENSMUST00000124078ENSMUST00000129047ENSMUST00000129560ENSMUST00000134853ENSMUST00000147726ENSMUST00000150452ENSMUST00000151618
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00059D_0001ENSG00000156990ENST00000383820ENST00000418713ENST00000423108ENST00000427174ENST00000433535ENST00000433555ENST00000433972ENST00000451405ENST00000466141ENST00000472381ENST00000473522ENST00000475470ENST00000484134ENSG00000187288ENST00000336832ENST00000383817ENST00000423850ENST00000430427ENST00000443115ENST00000618572CIL_00059D_0002ENSMUSG00000030278ENSMUST00000032416ENSMUST00000113089ENSMUST00000113091ENSMUST00000133348ENSMUSG00000051169ENSMUST00000060634ENSMUST00000113092ENSMUST00000124078ENSMUST00000129047ENSMUST00000134853ENSMUST00000147726ENSMUST00000150452
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000156990 ENST00000383820 8.024±0.00 4.231±0.00 N/A 3.300±0.43 5.200±4.89 6.537±0.00 5.830±0.00 11.530±0.00 8.268±0.00 3.964±0.00 9.296±6.79 10.946±2.67 16.479±8.61 23.929±0.91
ENST00000418713 N/A N/A N/A N/A 0.606±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000423108 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.988±0.00 2.045±0.00 N/A N/A
ENST00000424438 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000427174 N/A N/A N/A 5.399±0.00 N/A N/A 0.409±0.00 N/A 1.410±0.00 N/A N/A N/A 3.400±0.00 N/A
ENST00000433535 N/A N/A N/A N/A N/A N/A 2.182±0.00 N/A 4.419±0.00 0.304±0.00 12.023±0.00 N/A N/A N/A
ENST00000433555 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.862±0.54 N/A 4.854±0.00 N/A N/A
ENST00000433972 3.702±0.00 4.398±0.00 0.595±0.00 4.634±2.21 4.596±0.00 2.997±2.70 2.477±0.00 2.839±1.90 0.644±0.00 1.506±0.00 N/A 3.169±2.48 2.087±0.46 5.830±0.00
ENST00000451405 N/A N/A N/A N/A N/A N/A 0.441±0.00 N/A 0.673±0.00 N/A N/A N/A N/A N/A
ENST00000460909 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464783 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466141 N/A 3.810±0.00 N/A N/A 0.350±0.00 0.531±0.00 0.291±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000472381 N/A N/A 1.044±0.00 N/A 0.778±0.00 1.800±0.00 N/A 1.352±0.00 N/A 0.393±0.00 N/A N/A N/A N/A
ENST00000473522 N/A N/A N/A N/A N/A N/A 0.637±0.00 N/A 1.067±0.00 N/A N/A N/A N/A N/A
ENST00000475470 N/A N/A 0.197±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484134 N/A N/A N/A N/A N/A 0.159±0.00 0.107±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000485705 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000187288 ENST00000336832 94.937±0.00 N/A N/A N/A 350.179±0.00 3.219±0.18 N/A N/A N/A N/A N/A N/A N/A 0.804±0.00
ENST00000383817 36.930±0.00 0.058±0.00 N/A N/A 76.708±0.00 N/A 0.641±0.00 0.057±0.00 N/A 0.245±0.00 N/A N/A 0.190±0.06 N/A
ENST00000423850 N/A 0.166±0.00 N/A 0.074±0.00 N/A N/A 1.480±0.00 N/A N/A 0.185±0.00 0.710±0.00 0.106±0.00 0.133±0.00 0.389±0.00
ENST00000430427 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.785±0.00 N/A N/A N/A N/A
ENST00000443115 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.913±0.00 N/A N/A N/A
ENST00000455015 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487454 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000618572 N/A 0.059±0.00 N/A N/A N/A N/A N/A 0.544±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030278 ENSMUST00000032416 496.595±344.24 76.666±18.68 6.054±2.75 0.030±0.00 147.800±50.04 3.737±1.57 3.342±1.73 7.903±2.95 0.211±0.20 10.444±5.60 1.311±0.43 26.899±14.59 2.283±4.18 0.508±0.23
ENSMUST00000113089 386.725±221.63 135.171±41.61 7.291±0.73 0.014±0.00 221.066±105.79 6.555±1.43 5.362±3.37 10.793±4.70 N/A 14.555±6.94 2.108±1.67 50.016±15.39 2.018±1.85 0.985±0.43
ENSMUST00000113091 N/A N/A N/A 0.016±0.01 114.543±0.00 N/A 8.150±3.98 13.018±1.97 0.057±0.00 N/A 0.943±0.00 12.831±0.00 2.612±3.37 N/A
ENSMUST00000133348 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.381±0.00 N/A
ENSMUSG00000051169 ENSMUST00000060634 3.614±1.59 2.058±0.49 1.273±0.07 1.493±0.51 2.729±0.55 3.641±0.57 1.625±0.48 6.770±1.29 2.942±1.49 1.806±0.00 1.657±0.72 2.380±0.89 3.180±1.88 1.175±0.00
ENSMUST00000113092 7.306±2.75 7.524±2.38 3.522±0.86 3.257±1.87 11.544±2.39 6.428±1.15 2.747±0.92 15.467±5.32 10.303±5.21 3.945±0.93 2.890±0.78 4.794±1.44 5.322±4.45 4.540±0.52
ENSMUST00000124078 N/A N/A N/A 1.102±0.00 N/A N/A N/A N/A N/A N/A N/A 2.135±0.51 N/A 0.659±0.00
ENSMUST00000129047 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.978±0.77 N/A 1.861±0.14
ENSMUST00000129560 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134853 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.327±0.00 N/A N/A
ENSMUST00000147726 N/A N/A N/A N/A 2.911±0.00 N/A N/A N/A N/A N/A N/A 4.397±0.00 1.175±0.00 N/A
ENSMUST00000150452 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.289±0.00 N/A 1.600±0.00 N/A N/A
ENSMUST00000151618 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Loading