C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transient receptor potential cation channel, subfamily M, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000124597 Trpm1-017 ENSMUSG00000030523 10090 + 7:64244811-64268140 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLiverLungMuscleOvaryPlacentaENSMUST00000124597
Transcript ID Breast Liver Lung Muscle Ovary Placenta
ENSMUST00000124597 0.147±0.00 0.028±0.00 0.125±0.00 0.127±0.05 0.232±0.10 0.134±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081G CIL_00081G_0002 VISTA 7:63656077-64260826

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000256552 TRPM1-004 protein_coding Homo_sapiens 0 800
ENST00000397795 TRPM1-001 protein_coding Homo_sapiens 0 800
ENST00000542188 TRPM1-201 protein_coding Homo_sapiens 0 800
ENST00000558445 TRPM1-008 protein_coding Homo_sapiens 0 800
ENST00000558768 TRPM1-007 protein_coding Homo_sapiens 0 800
ENST00000559177 TRPM1-002 protein_coding Homo_sapiens 0 773
ENST00000560801 TRPM1-006 nonsense_mediated_decay Homo_sapiens 0 802
ENST00000611448 TRPM1-202 protein_coding Homo_sapiens 0 800
ENST00000615583 TRPM1-203 protein_coding Homo_sapiens 0 800
ENST00000617515 TRPM1-204 protein_coding Homo_sapiens 0 800
ENST00000618210 TRPM1-205 protein_coding Homo_sapiens 0 800
ENST00000621076 TRPM1-206 protein_coding Homo_sapiens 0 802

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