C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | golgi associated, gamma adaptin ear containing, ARF binding protein 3 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000125097  |
Gga3-007 |
ENSMUSG00000020740 |
10090 | - |
11:115591642-115603893  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008PW | CIL_0008PW_0002 | VISTA | 11:115369788-115971497 |
| CIL_0007IW | CIL_0007IW_0002 | CGP | 11:115564434-115604051 |
| CIL_0007I1 | CIL_0007I1_0002 | CGP | 11:115584255-115608036 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005802 | IEA | trans-Golgi network |
| GO:0006886 | IEA | intracellular protein transport |
| GO:0030306 | IEA | ADP-ribosylation factor binding |
| GO:0045732 | IGI | positive regulation of protein catabolic process |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000537686
|
GGA3-002 | protein_coding | Homo_sapiens | 0 | 438 |
|
ENST00000538886
|
GGA3-001 | protein_coding | Homo_sapiens | 0 | 291 |
|
ENST00000577435
|
GGA3-012 | nonsense_mediated_decay | Homo_sapiens | 2e-17 | 94 |
|
ENST00000613421
|
GGA3-007 | retained_intron | Homo_sapiens | 0 | 438 |
|
ENST00000621217
|
GGA3-008 | nonsense_mediated_decay | Homo_sapiens | 0 | 438 |
|
ENST00000621870
|
GGA3-003 | nonsense_mediated_decay | Homo_sapiens | 0.000000000000002 | 90 |
