C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | golgi-associated, gamma adaptin ear containing, ARF binding protein 3 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000621217  |
GGA3-008 |
ENSG00000125447 |
9606 | - |
17:75236599-75261621  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008PW | CIL_0008PW_0001 | VISTA | 17:75051738-75652852 |
| CIL_0007IW | CIL_0007IW_0001 | CGP | 17:75205659-75262363 |
| CIL_0007I1 | CIL_0007I1_0001 | CGP | 17:75236599-75266373 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005802 | IEA | trans-Golgi network |
| GO:0006886 | IEA | intracellular protein transport |
| GO:0030306 | IEA | ADP-ribosylation factor binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000148782
|
Gga3-008 | processed_transcript | Mus_musculus | 0 | 1083 |
|
ENSMUST00000106508
|
Gga3-002 | protein_coding | Mus_musculus | 0 | 841 |
|
ENSMUST00000019135
|
Gga3-001 | protein_coding | Mus_musculus | 0 | 841 |
|
ENSMUST00000128437
|
Gga3-006 | processed_transcript | Mus_musculus | 0 | 606 |
|
ENSMUST00000123485
|
Gga3-010 | processed_transcript | Mus_musculus | 0 | 577 |
|
ENSMUST00000156173
|
Gga3-003 | nonsense_mediated_decay | Mus_musculus | 0 | 564 |
|
ENSMUST00000125097
|
Gga3-007 | protein_coding | Mus_musculus | 0 | 438 |
|
ENSMUST00000123831
|
Gga3-009 | processed_transcript | Mus_musculus | 0 | 283 |
|
ENSMUST00000154832
|
Gga3-011 | processed_transcript | Mus_musculus | 0 | 252 |
|
ENSMUST00000041587
|
Gga1-201 | protein_coding | Mus_musculus | 1.4013e-45 | 189 |
|
ENSMUST00000132503
|
Gga3-005 | processed_transcript | Mus_musculus | 0.000000000000002 | 90 |
