C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: golgi-associated, gamma adaptin ear containing, ARF binding protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000613421 GGA3-007 ENSG00000125447 9606 - 17:75236602-75261623 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderHeartLungOvaryENST00000613421
Transcript ID Adrenal Bladder Heart Lung Ovary
ENST00000613421 4.272±0.00 1.036±0.00 1.487±0.00 1.708±0.00 1.496±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PW CIL_0008PW_0001 VISTA 17:75051738-75652852
CIL_0007IW CIL_0007IW_0001 CGP 17:75205659-75262363
CIL_0007I1 CIL_0007I1_0001 CGP 17:75236599-75266373

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000156173 Gga3-003 nonsense_mediated_decay Mus_musculus 0 922
ENSMUST00000106508 Gga3-002 protein_coding Mus_musculus 0 922
ENSMUST00000019135 Gga3-001 protein_coding Mus_musculus 0 922
ENSMUST00000128437 Gga3-006 processed_transcript Mus_musculus 0 606
ENSMUST00000123485 Gga3-010 processed_transcript Mus_musculus 0 577
ENSMUST00000148782 Gga3-008 processed_transcript Mus_musculus 0 564
ENSMUST00000125097 Gga3-007 protein_coding Mus_musculus 0 438
ENSMUST00000123831 Gga3-009 processed_transcript Mus_musculus 0 283
ENSMUST00000154832 Gga3-011 processed_transcript Mus_musculus 0 252
ENSMUST00000041587 Gga1-201 protein_coding Mus_musculus 0 241
ENSMUST00000132503 Gga3-005 processed_transcript Mus_musculus 0.000000000000003 90

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