C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glypican 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000125435 Gpc6-002 ENSMUSG00000058571 10090 + 14:116925531-117975406 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonOvaryTestisENSMUST00000125435
Transcript ID Adipose Adrenal Breast Colon Ovary Testis
ENSMUST00000125435 2.126±0.00 2.102±0.00 1.500±0.00 0.455±0.06 0.906±0.00 0.160±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002EC CIL_0002EC_0002 CGP 14:115092215-117979529
CIL_0000E8 CIL_0000E8_0002 CGP 14:116925297-118052246

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005634 IEA nucleus
GO:0005887 ISS integral component of plasma membrane
GO:0016477 IEA cell migration
GO:0031225 IEA anchored component of membrane
GO:0043395 IEA heparan sulfate proteoglycan binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000377047 GPC6-001 protein_coding Homo_sapiens 0 1748
ENST00000617456 GPC6-201 protein_coding Homo_sapiens 0 593

Loading