C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: vacuolar protein sorting 8 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000125487 Vps8-009 ENSMUSG00000033653 10090 + 16:21470187-21641572 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000125487
Transcript ID Testis
ENSMUST00000125487 1.471±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003YA CIL_0003YA_0003 CGP 16:21423118-21694665

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000287546 VPS8-201 protein_coding Homo_sapiens 0 2881
ENST00000436792 VPS8-002 protein_coding Homo_sapiens 0 2881
ENST00000446204 VPS8-003 protein_coding Homo_sapiens 0 2061
ENST00000452140 VPS8-007 nonsense_mediated_decay Homo_sapiens 0 200
ENST00000458721 VPS8-020 nonsense_mediated_decay Homo_sapiens 0 584
ENST00000463687 VPS8-022 processed_transcript Homo_sapiens 0 608
ENST00000488255 VPS8-023 retained_intron Homo_sapiens 0 442
ENST00000492449 VPS8-006 retained_intron Homo_sapiens 0 2366

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