| Transcript ID | Breast | Placenta |
|---|---|---|
| ENSMUST00000125504 | 0.192±0.00 | 0.031±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | collagen, type XXVII, alpha 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000125504  |
Col27a1-002 |
ENSMUSG00000045672 |
10090 | + |
4:63214004-63292831  |
retained_intron |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008AD | CIL_0008AD_0002 | VISTA | 4:62756998-63358386 |
| CIL_0004P5 | CIL_0004P5_0002 | CGP | 4:63165634-63334991 |
| CIL_0004P4 | CIL_0004P4_0002 | CGP | 4:63214004-63348163 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000356083
|
COL27A1-001 | protein_coding | Homo_sapiens | 0 | 1419 |
|
ENST00000451716
|
COL27A1-004 | protein_coding | Homo_sapiens | 0 | 231 |
|
ENST00000485397
|
COL27A1-005 | retained_intron | Homo_sapiens | 0 | 329 |
|
ENST00000494090
|
COL27A1-002 | nonsense_mediated_decay | Homo_sapiens | 0 | 1158 |
