C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: selenoprotein T precursor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000619570 SELT-202 ENSG00000198843 9606 + 3:150603320-150627997 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartLiverMuscleOvaryENST00000619570
Transcript ID Heart Liver Muscle Ovary
ENST00000619570 6.599±0.00 13.882±0.00 5.210±0.00 14.807±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002QY CIL_0002QY_0001 CGP 3:150408335-150603228
CIL_0004SR CIL_0004SR_0002 CGP 3:150541994-150603228
CIL_0002IA CIL_0002IA_0001 CGP 3:150546678-150630445
CIL_0002IB CIL_0002IB_0001 CGP 3:150602875-150703971

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008430 IEA selenium binding
GO:0045454 IEA cell redox homeostasis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107924 Selt-001 protein_coding Mus_musculus 0 1242
ENSMUST00000125815 Selt-002 retained_intron Mus_musculus 0 745
ENSMUST00000119098 Gm15359-001 processed_pseudogene Mus_musculus 0 715

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