C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000126168 Uspl1-005 ENSMUSG00000041264 10090 + 5:149184678-149215430 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryTestisENSMUST00000126168
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Testis
ENSMUST00000126168 0.551±0.00 1.467±0.01 2.847±0.51 2.259±0.80 1.088±0.53 2.013±0.62 1.457±0.50 0.900±0.00 1.161±0.11 1.603±0.23 1.763±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UA CIL_0007UA_0002 VISTA 5:149020224-149622595
CIL_0004CF CIL_0004CF_0002 CGP 5:149046702-149215434
CIL_0004CN CIL_0004CN_0003 CGP 5:149184350-149288045

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006508 IEA proteolysis
GO:0008283 IEA cell proliferation
GO:0015030 IEA Cajal body
GO:0016926 IEA protein desumoylation
GO:0030576 IEA Cajal body organization
GO:0032183 IEA SUMO binding
GO:0070140 IEA SUMO-specific isopeptidase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000255304 USPL1-001 protein_coding Homo_sapiens 0 826
ENST00000614860 USPL1-003 protein_coding Homo_sapiens 0 756

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