C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil serine rich 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000126214 Ccser1-001 ENSMUSG00000039578 10090 + 6:61180324-62382865 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainHeartLiverMuscleOvaryTestisENSMUST00000126214
Transcript ID Adrenal Brain Heart Liver Muscle Ovary Testis
ENSMUST00000126214 0.078±0.03 2.671±1.54 0.015±0.00 0.008±0.01 0.015±0.00 0.112±0.11 0.015±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00083N CIL_00083N_0002 VISTA 6:60741566-61344404
CIL_0000KN CIL_0000KN_0002 CGP 6:60924976-62382865
CIL_0001RV CIL_0001RV_0003 CGP 6:61180324-64668282

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000432775 CCSER1-002 protein_coding Homo_sapiens 0 1576
ENST00000502478 CCSER1-008 nonsense_mediated_decay Homo_sapiens 0 207
ENST00000505073 CCSER1-003 nonsense_mediated_decay Homo_sapiens 0 1522
ENST00000509176 CCSER1-001 protein_coding Homo_sapiens 0 2196
ENST00000513522 CCSER1-009 nonsense_mediated_decay Homo_sapiens 0 425

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