C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase, non-receptor type 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000126839 Ptpn1-002 ENSMUSG00000027540 10090 + 2:167932372-167979385 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyLiverPlacentaTestisENSMUST00000126839
Transcript ID Brain Kidney Liver Placenta Testis
ENSMUST00000126839 1.538±0.00 1.355±0.00 1.013±0.00 1.501±0.07 0.348±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZW CIL_0007ZW_0002 VISTA 2:167542374-168145654
CIL_0007H3 CIL_0007H3_0002 CGP 2:167688915-167979385
CIL_0007VZ CIL_0007VZ_0002 VISTA 2:167749064-168350864
CIL_0007GS CIL_0007GS_0002 CGP 2:167932057-168010618

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000371621 PTPN1-001 protein_coding Homo_sapiens 0 1053
ENST00000541713 PTPN1-201 protein_coding Homo_sapiens 0 957

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