C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CTD nuclear envelope phosphatase 1 regulatory subunit 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000565556 CNEP1R1-003 ENSG00000205423 9606 + 16:50025520-50036630 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000565556
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000565556 0.216±0.00 1.620±0.00 1.006±0.00 1.295±0.00 0.891±0.00 1.915±0.00 0.709±0.00 1.370±0.00 0.217±0.00 0.547±0.00 1.938±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002VV CIL_0002VV_0001 CGP 16:49487524-50037088
CIL_00078I CIL_00078I_0001 CGP 16:50024410-50106387

Gene Ontology

GO IDEvidence TypeGO Description
GO:0035307 IEA positive regulation of protein dephosphorylation
GO:0071595 IEA Nem1-Spo7 phosphatase complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000095214 Cnep1r1-001 protein_coding Mus_musculus 0 1029
ENSMUST00000127490 Cnep1r1-002 nonsense_mediated_decay Mus_musculus 0 804
ENSMUST00000128290 Cnep1r1-004 retained_intron Mus_musculus 0 645
ENSMUST00000117775 Cnep1r1-005 protein_coding Mus_musculus 0 481
ENSMUST00000131891 Cnep1r1-006 processed_transcript Mus_musculus 0 453
ENSMUST00000121097 Cnep1r1-003 protein_coding Mus_musculus 0 385

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