C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | brain and reproductive organ-expressed protein | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000128132  |
Bre-004 |
ENSMUSG00000052139 |
10090 | + |
5:31698051-31820562  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00013J | CIL_00013J_0002 | CGP | 5:31526995-31701972 |
| CIL_00013K | CIL_00013K_0002 | CGP | 5:31596935-31701972 |
| CIL_0003JP | CIL_0003JP_0003 | CGP | 5:31624439-32084962 |
| CIL_0003JO | CIL_0003JO_0003 | CGP | 5:31697684-32157831 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000342045
|
BRE-004 | protein_coding | Homo_sapiens | 5.00264e-43 | 180 |
|
ENST00000344773
|
BRE-001 | protein_coding | Homo_sapiens | 0 | 213 |
|
ENST00000361704
|
BRE-005 | protein_coding | Homo_sapiens | 0 | 213 |
|
ENST00000379624
|
BRE-003 | protein_coding | Homo_sapiens | 0 | 213 |
|
ENST00000379629
|
BRE-009 | protein_coding | Homo_sapiens | 8.99634e-43 | 178 |
|
ENST00000379632
|
BRE-002 | protein_coding | Homo_sapiens | 5.00264e-43 | 180 |
|
ENST00000436924
|
BRE-006 | protein_coding | Homo_sapiens | 2.00386e-43 | 180 |
|
ENST00000448427
|
MRPL33-006 | nonsense_mediated_decay | Homo_sapiens | 9.94922e-44 | 180 |
|
ENST00000492702
|
BRE-007 | retained_intron | Homo_sapiens | 0 | 213 |
|
ENST00000496951
|
BRE-008 | retained_intron | Homo_sapiens | 0 | 213 |
|
ENST00000604932
|
BRE-011 | non_stop_decay | Homo_sapiens | 0.000000000002 | 77 |
