C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | brain and reproductive organ-expressed (TNFRSF1A modulator) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000492702  |
BRE-007 |
ENSG00000158019 |
9606 | + |
2:27890763-27895068  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00013J | CIL_00013J_0001 | CGP | 2:27663471-27988087 |
| CIL_00013K | CIL_00013K_0001 | CGP | 2:27771717-27988087 |
| CIL_0003JP | CIL_0003JP_0002 | CGP | 2:27781364-28338901 |
| CIL_0003JO | CIL_0003JO_0002 | CGP | 2:27889941-28417312 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000155155
|
Bre-011 | processed_transcript | Mus_musculus | 0 | 287 |
|
ENSMUST00000152211
|
Bre-006 | retained_intron | Mus_musculus | 0 | 287 |
|
ENSMUST00000080598
|
Bre-001 | protein_coding | Mus_musculus | 0 | 287 |
|
ENSMUST00000114514
|
Bre-005 | retained_intron | Mus_musculus | 0 | 268 |
|
ENSMUST00000147592
|
Bre-008 | retained_intron | Mus_musculus | 0 | 259 |
|
ENSMUST00000114515
|
Bre-010 | protein_coding | Mus_musculus | 0 | 235 |
|
ENSMUST00000128132
|
Bre-004 | nonsense_mediated_decay | Mus_musculus | 0 | 213 |
|
ENSMUST00000142394
|
Mrpl33-007 | processed_transcript | Mus_musculus | 8.00001e-42 | 174 |
|
ENSMUST00000125589
|
Bre-009 | nonsense_mediated_decay | Mus_musculus | 4.00001e-40 | 169 |
