C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fibroblast activation protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000128139 Fap-007 ENSMUSG00000000392 10090 - 2:62501123-62503424 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainKidneyLiverOvaryPlacentaENSMUST00000128139
Transcript ID Adrenal Brain Kidney Liver Ovary Placenta
ENSMUST00000128139 0.551±0.34 5.610±0.00 0.142±0.06 0.262±0.10 1.543±0.99 0.974±0.89

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003S0 CIL_0003S0_0003 CGP 2:62474530-62574075
CIL_0005KX CIL_0005KX_0002 CGP 2:62500943-62646255

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006508 IDA proteolysis
GO:0008233 IDA peptidase activity
GO:0045177 IDA apical part of cell
GO:0045178 IDA basal part of cell

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000188790 FAP-001 protein_coding Homo_sapiens 0 206
ENST00000422436 FAP-004 nonsense_mediated_decay Homo_sapiens 0 206
ENST00000443424 FAP-015 protein_coding Homo_sapiens 0 206
ENST00000461506 FAP-010 retained_intron Homo_sapiens 0 206
ENST00000462608 FAP-014 nonsense_mediated_decay Homo_sapiens 0 564
ENST00000480044 FAP-005 retained_intron Homo_sapiens 0 206

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