C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fibroblast activation protein, alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000443424 FAP-015 ENSG00000078098 9606 - 2:162170718-162243456 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartLiverLungOvaryPlacentaENST00000443424
Transcript ID Brain Colon Heart Liver Lung Ovary Placenta
ENST00000443424 0.142±0.00 0.174±0.00 0.177±0.00 0.451±0.00 0.524±0.29 1.144±0.00 2.183±0.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003S0 CIL_0003S0_0002 CGP 2:162142873-162245151
CIL_0005KX CIL_0005KX_0001 CGP 2:162170684-162318703

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004252 IEA serine-type endopeptidase activity
GO:0006508 IEA proteolysis
GO:0008236 IEA serine-type peptidase activity
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000174234 Fap-006 protein_coding Mus_musculus 0 2785
ENSMUST00000174448 Fap-009 protein_coding Mus_musculus 0 2488
ENSMUST00000000402 Fap-008 protein_coding Mus_musculus 0 2488
ENSMUST00000102732 Fap-001 protein_coding Mus_musculus 0 2488
ENSMUST00000172676 Fap-002 retained_intron Mus_musculus 0 1391
ENSMUST00000152085 Fap-004 processed_transcript Mus_musculus 0 1375
ENSMUST00000136297 Fap-003 retained_intron Mus_musculus 0 782
ENSMUST00000128139 Fap-007 nonsense_mediated_decay Mus_musculus 0 206

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