C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fibroblast activation protein, alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000422436 FAP-004 ENSG00000078098 9606 - 2:162170684-162198826 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastLiverMuscleOvaryTestisENST00000422436
Transcript ID Adipose Adrenal Brain Breast Liver Muscle Ovary Testis
ENST00000422436 1.290±0.00 0.571±0.00 0.355±0.00 1.455±0.00 0.064±0.00 0.810±0.00 0.834±0.03 1.325±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003S0 CIL_0003S0_0002 CGP 2:162142873-162245151
CIL_0005KX CIL_0005KX_0001 CGP 2:162170684-162318703

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000174448 Fap-009 protein_coding Mus_musculus 0 1099
ENSMUST00000000402 Fap-008 protein_coding Mus_musculus 0 1099
ENSMUST00000174234 Fap-006 protein_coding Mus_musculus 0 1099
ENSMUST00000152085 Fap-004 processed_transcript Mus_musculus 0 1099
ENSMUST00000102732 Fap-001 protein_coding Mus_musculus 0 1099
ENSMUST00000128139 Fap-007 nonsense_mediated_decay Mus_musculus 0 206
ENSMUST00000172676 Fap-002 retained_intron Mus_musculus 3e-20 104

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