C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear receptor subfamily 1, group H, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000128354 Nr1h2-012 ENSMUSG00000060601 10090 - 7:44550374-44551623 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainPlacentaENSMUST00000128354
Transcript ID Brain Placenta
ENSMUST00000128354 19.516±0.00 24.002±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004IL CIL_0004IL_0002 CGP 7:44549616-44586862

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000253727 NR1H2-001 protein_coding Homo_sapiens 0 433
ENST00000411902 NR1H2-003 protein_coding Homo_sapiens 0 433
ENST00000593532 NR1H2-010 nonsense_mediated_decay Homo_sapiens 0 220
ENST00000593926 NR1H2-002 protein_coding Homo_sapiens 0 433
ENST00000597085 NR1H2-013 retained_intron Homo_sapiens 0 390
ENST00000598168 NR1H2-014 protein_coding Homo_sapiens 0 257
ENST00000599105 NR1H2-005 protein_coding Homo_sapiens 0 220

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