C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: signal sequence receptor, delta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000129239 Ssr4-007 ENSMUSG00000002014 10090 + X:73788844-73790830 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryENSMUST00000129239
Transcript ID Brain Ovary
ENSMUST00000129239 8.559±6.38 10.650±4.75

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001UU CIL_0001UU_0002 CGP X:73778963-73790830
CIL_0001UT CIL_0001UT_0002 CGP X:73787028-73824969

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000320857 SSR4-005 protein_coding Homo_sapiens 0 383
ENST00000370086 SSR4-006 protein_coding Homo_sapiens 0 383
ENST00000370087 SSR4-009 protein_coding Homo_sapiens 0 383
ENST00000460616 SSR4-008 processed_transcript Homo_sapiens 0 392
ENST00000471724 SSR4-011 processed_transcript Homo_sapiens 3e-40 169
ENST00000471880 SSR4-012 processed_transcript Homo_sapiens 0 383
ENST00000485612 SSR4-003 processed_transcript Homo_sapiens 0 383
ENST00000486204 SSR4-002 processed_transcript Homo_sapiens 0 383

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