C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: signal sequence receptor, delta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000471724 SSR4-011 ENSG00000180879 9606 + X:153794676-153797503 processed_transcript

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001UV CIL_0001UV_0001 CGP X:153776412-153794523
CIL_0001UU CIL_0001UU_0001 CGP X:153785766-153798505
CIL_0001UT CIL_0001UT_0001 CGP X:153793516-153830565

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000130738 Ssr4-002 retained_intron Mus_musculus 2.8026e-45 185
ENSMUST00000141721 Ssr4-003 retained_intron Mus_musculus 2.8026e-45 185
ENSMUST00000166518 Ssr4-201 protein_coding Mus_musculus 8.40779e-45 183
ENSMUST00000155552 Ssr4-005 retained_intron Mus_musculus 8.40779e-45 183
ENSMUST00000142829 Ssr4-006 retained_intron Mus_musculus 2.94273e-44 182
ENSMUST00000002090 Ssr4-001 protein_coding Mus_musculus 2.94273e-44 182
ENSMUST00000129239 Ssr4-007 retained_intron Mus_musculus 3e-40 169
ENSMUST00000136544 Ssr4-004 retained_intron Mus_musculus 3e-20 102

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