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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | topoisomerase (DNA) III alpha | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000130068  |
Top3a-004 |
ENSMUSG00000002814 |
10090 | - |
11:60761732-60777299  |
protein_coding |
|
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Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0005K3 | CIL_0005K3_0002 | CGP | 11:60728398-60777365 |
| CIL_00002B | CIL_00002B_0003 | CGP | 11:60740058-60788287 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003677 | IEA | DNA binding |
| GO:0003917 | IEA | DNA topoisomerase type I activity |
| GO:0006265 | IEA | DNA topological change |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000321105
|
TOP3A-001 | protein_coding | Homo_sapiens | 0 | 219 |
|
ENST00000461127
|
TOP3A-004 | nonsense_mediated_decay | Homo_sapiens | 2e-23 | 113 |
|
ENST00000469739
|
TOP3A-003 | retained_intron | Homo_sapiens | 3e-23 | 115 |
|
ENST00000472959
|
TOP3A-005 | retained_intron | Homo_sapiens | 3e-23 | 113 |
|
ENST00000542570
|
TOP3A-201 | protein_coding | Homo_sapiens | 0 | 219 |
|
ENST00000580095
|
TOP3A-020 | protein_coding | Homo_sapiens | 0 | 219 |
|
ENST00000582981
|
TOP3A-009 | nonsense_mediated_decay | Homo_sapiens | 3.00018e-42 | 178 |
|
ENST00000583328
|
TOP3A-018 | retained_intron | Homo_sapiens | 0 | 219 |
|
ENST00000584582
|
TOP3A-010 | nonsense_mediated_decay | Homo_sapiens | 3e-23 | 115 |
|
ENST00000584669
|
TOP3A-011 | processed_transcript | Homo_sapiens | 0 | 219 |
