C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: vacuolar protein sorting 16 (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000130258 Vps16-002 ENSMUSG00000027411 10090 + 2:130424404-130440296 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000130258
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000130258 34.394±0.00 38.539±0.00 21.116±0.00 11.430±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SG CIL_0007SG_0002 VISTA 2:130051805-130652389
CIL_00006D CIL_00006D_0002 CGP 2:130406478-130424701
CIL_00012E CIL_00012E_0002 CGP 2:130417247-130444269
CIL_00006B CIL_00006B_0002 CGP 2:130424339-130554026

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000380445 VPS16-001 protein_coding Homo_sapiens 0 808
ENST00000380469 VPS16-003 protein_coding Homo_sapiens 0 808
ENST00000417508 VPS16-004 protein_coding Homo_sapiens 0 359
ENST00000453689 VPS16-005 protein_coding Homo_sapiens 0 359

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