C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tropomodulin 4 (muscle)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000024294 tmod4-201 ENSDARG00000020890 7955 + 16:31909822-31930199 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000024294
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000024294 1.168±0.93 2.855±0.92 5.116±4.90 0.228±0.00 349.980±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00064I CIL_00064I_0001 CGP 16:31887582-31930207
CIL_0003MO CIL_0003MO_0001 CGP 16:31896712-31936226

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005523 IEA tropomyosin binding
GO:0005856 IEA cytoskeleton

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000005769 Tmod4-001 protein_coding Mus_musculus 0 241
ENSMUST00000107227 Tmod4-005 protein_coding Mus_musculus 0 241
ENSMUST00000130545 Tmod4-002 retained_intron Mus_musculus 2e-40 171
ENSMUST00000131597 Tmod4-006 protein_coding Mus_musculus 0 241
ENST00000295314 TMOD4-001 protein_coding Homo_sapiens 0 230
ENST00000441701 TMOD4-005 protein_coding Homo_sapiens 0 195
ENST00000463543 TMOD4-002 nonsense_mediated_decay Homo_sapiens 5.99994e-41 172
ENST00000488488 TMOD4-006 processed_transcript Homo_sapiens 3.00004e-41 172
ENST00000491094 VPS72-003 retained_intron Homo_sapiens 5.99994e-41 174

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