C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: N-terminal EF-hand calcium binding protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000130824 Necab3-007 ENSMUSG00000027489 10090 - 2:154545045-154546794 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000130824
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000130824 2.008±0.00 1.387±0.12 3.859±0.00 1.270±0.15 0.232±0.11 0.165±0.02 0.322±0.02 0.682±0.56 0.715±0.00 0.111±0.04 2.286±0.91 0.486±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00051Z CIL_00051Z_0002 CGP 2:154436481-154558890
CIL_000520 CIL_000520_0002 CGP 2:154544399-154558890

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000246190 NECAB3-010 protein_coding Homo_sapiens 0 431
ENST00000375238 NECAB3-003 protein_coding Homo_sapiens 0 429
ENST00000463246 NECAB3-013 processed_transcript Homo_sapiens 0 337
ENST00000477778 NECAB3-002 processed_transcript Homo_sapiens 0 425
ENST00000478237 NECAB3-015 processed_transcript Homo_sapiens 0 429
ENST00000480994 NECAB3-006 protein_coding Homo_sapiens 0 346
ENST00000483813 NECAB3-007 processed_transcript Homo_sapiens 0 431
ENST00000485399 NECAB3-009 nonsense_mediated_decay Homo_sapiens 0 429
ENST00000485976 NECAB3-014 processed_transcript Homo_sapiens 0 388
ENST00000488489 NECAB3-004 nonsense_mediated_decay Homo_sapiens 0 429
ENST00000494174 NECAB3-001 processed_transcript Homo_sapiens 0 429
ENST00000606525 NECAB3-018 processed_transcript Homo_sapiens 0 429
ENST00000606690 NECAB3-020 protein_coding Homo_sapiens 0 191

Loading