C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: N-terminal EF-hand calcium binding protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000485399 NECAB3-009 ENSG00000125967 9606 - 20:33657637-33674389 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastMuscleOvaryPlacentaENST00000485399
Transcript ID Breast Muscle Ovary Placenta
ENST00000485399 1.048±0.00 2.530±0.00 4.923±0.00 2.111±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00051Z CIL_00051Z_0001 CGP 20:33490075-33674463
CIL_000520 CIL_000520_0001 CGP 20:33657087-33674463

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000000895 Necab3-001 protein_coding Mus_musculus 0 608
ENSMUST00000130824 Necab3-007 retained_intron Mus_musculus 0 429
ENSMUST00000109716 Necab3-002 protein_coding Mus_musculus 0 374

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