C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: N-terminal EF-hand calcium binding protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000488489 NECAB3-004 ENSG00000125967 9606 - 20:33657088-33674420 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonLiverLungMuscleOvaryENST00000488489
Transcript ID Brain Colon Liver Lung Muscle Ovary
ENST00000488489 1.936±0.00 1.101±0.00 0.660±0.30 1.764±0.13 1.213±0.00 5.176±4.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00051Z CIL_00051Z_0001 CGP 20:33490075-33674463
CIL_000520 CIL_000520_0001 CGP 20:33657087-33674463

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000000895 Necab3-001 protein_coding Mus_musculus 0 608
ENSMUST00000130824 Necab3-007 retained_intron Mus_musculus 0 429
ENSMUST00000109716 Necab3-002 protein_coding Mus_musculus 0 374

Loading