C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: phosphomannomutase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000567697 PMM2-007 ENSG00000140650 9606 + 16:8807564-8849325 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonENST00000567697
Transcript ID Breast Colon
ENST00000567697 4.901±0.00 2.420±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000EU CIL_0000EU_0001 CGP 16:8674565-8797648
CIL_0000ET CIL_0000ET_0001 CGP 16:8780384-8849331
CIL_0000EW CIL_0000EW_0001 CGP 16:8788823-8869012

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000131385 Pmm2-005 retained_intron Mus_musculus 0 464
ENSMUST00000023396 Pmm2-001 protein_coding Mus_musculus 0 459
ENSMUST00000134975 Pmm2-006 processed_transcript Mus_musculus 0 257
ENSMUST00000130885 Pmm2-003 retained_intron Mus_musculus 0 243
ENSMUST00000179332 5730455P16Rik-201 protein_coding Mus_musculus 0.00000000008 75
ENSMUST00000103225 5730455P16Rik-001 protein_coding Mus_musculus 0.00000000008 75

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