C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: phosphomannomutase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000564069 PMM2-014 ENSG00000140650 9606 + 16:8797912-8813067 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENST00000564069
Transcript ID Placenta
ENST00000564069 29.589±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000EU CIL_0000EU_0001 CGP 16:8674565-8797648
CIL_0000ET CIL_0000ET_0001 CGP 16:8780384-8849331
CIL_0000EW CIL_0000EW_0001 CGP 16:8788823-8869012

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004615 IEA phosphomannomutase activity
GO:0005737 IEA cytoplasm
GO:0008152 IEA metabolic process
GO:0019307 IEA mannose biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023396 Pmm2-001 protein_coding Mus_musculus 0 660
ENSMUST00000130885 Pmm2-003 retained_intron Mus_musculus 0 606
ENSMUST00000134975 Pmm2-006 processed_transcript Mus_musculus 0 573
ENSMUST00000131385 Pmm2-005 retained_intron Mus_musculus 0 276

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