C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphomannomutase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000268261 PMM2-001 ENSG00000140650 9606 + 16:8797817-8849331 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastHeartMuscleOvaryPlacentaENST00000268261
Transcript ID Adipose Adrenal Breast Heart Muscle Ovary Placenta
ENST00000268261 12.876±0.00 32.668±0.00 20.003±0.00 5.938±0.00 1.923±1.72 11.265±3.54 25.603±11.49

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000EU CIL_0000EU_0001 CGP 16:8674565-8797648
CIL_0000ET CIL_0000ET_0001 CGP 16:8780384-8849331
CIL_0000EW CIL_0000EW_0001 CGP 16:8788823-8869012

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004615 IEA phosphomannomutase activity
GO:0005737 IEA cytoplasm
GO:0005829 TAS cytosol
GO:0006486 TAS protein glycosylation
GO:0006488 TAS dolichol-linked oligosaccharide biosynthetic process
GO:0008152 IEA metabolic process
GO:0009298 IEA GDP-mannose biosynthetic process
GO:0018279 TAS protein N-linked glycosylation via asparagine
GO:0019307 IEA mannose biosynthetic process
GO:0043025 IEA neuronal cell body
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023396 Pmm2-001 protein_coding Mus_musculus 0 852
ENSMUST00000130885 Pmm2-003 retained_intron Mus_musculus 0 636
ENSMUST00000134975 Pmm2-006 processed_transcript Mus_musculus 0 593
ENSMUST00000131385 Pmm2-005 retained_intron Mus_musculus 0 459

Loading