C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: golgi associated, gamma adaptin ear containing, ARF binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000131081 Gga2-006 ENSMUSG00000030872 10090 - 7:122010423-122021187 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverLungOvaryENSMUST00000131081
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Lung Ovary
ENSMUST00000131081 15.419±0.00 16.642±4.23 29.113±2.40 5.546±1.59 11.507±0.00 3.501±0.27 10.326±1.42 41.843±9.93

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006D5 CIL_0006D5_0002 CGP 7:121922839-122021222
CIL_0006D4 CIL_0006D4_0002 CGP 7:121986722-122067263

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309859 GGA2-001 protein_coding Homo_sapiens 0 278
ENST00000562117 GGA2-009 protein_coding Homo_sapiens 0 263
ENST00000562944 GGA2-006 protein_coding Homo_sapiens 0 272
ENST00000563494 GGA2-010 nonsense_mediated_decay Homo_sapiens 0 254
ENST00000566547 GGA2-004 retained_intron Homo_sapiens 1.99965e-42 176
ENST00000567468 GGA2-002 protein_coding Homo_sapiens 0 268
ENST00000568799 GGA2-007 retained_intron Homo_sapiens 0 296
ENST00000569189 GGA2-008 nonsense_mediated_decay Homo_sapiens 0 248
ENST00000570111 GGA2-011 nonsense_mediated_decay Homo_sapiens 0 254

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