C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: golgi-associated, gamma adaptin ear containing, ARF binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000568799 GGA2-007 ENSG00000103365 9606 - 16:23491676-23510494 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonLungOvaryENST00000568799
Transcript ID Brain Breast Colon Lung Ovary
ENST00000568799 2.036±0.00 6.709±0.00 3.088±0.00 3.588±0.00 2.589±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006D5 CIL_0006D5_0001 CGP 16:23388493-23521995
CIL_0006D4 CIL_0006D4_0001 CGP 16:23463542-23557731

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000131081 Gga2-006 retained_intron Mus_musculus 0 296
ENSMUST00000124566 Gga2-003 nonsense_mediated_decay Mus_musculus 0 294
ENSMUST00000145277 Gga2-002 retained_intron Mus_musculus 0 294
ENSMUST00000033160 Gga2-001 protein_coding Mus_musculus 0 294

Loading