C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: signal recognition particle 19
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000131713 Srp19-005 ENSMUSG00000014504 10090 + 18:34331123-34336521 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverMuscleOvaryPlacentaTestisENSMUST00000131713
Transcript ID Liver Muscle Ovary Placenta Testis
ENSMUST00000131713 1.822±0.11 9.071±1.78 34.341±1.64 37.650±13.46 5.159±1.96

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004UN CIL_0004UN_0002 CGP 18:34330847-34373415

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000282999 SRP19-002 protein_coding Homo_sapiens 0.000000000001 79
ENST00000445150 SRP19-005 protein_coding Homo_sapiens 0.0000000000009 79
ENST00000503445 CTC-487M23.8-002 processed_transcript Homo_sapiens 0.0000000000005 79
ENST00000505459 SRP19-001 protein_coding Homo_sapiens 0.000000000003 79
ENST00000506997 CTC-487M23.8-001 nonsense_mediated_decay Homo_sapiens 0.000000000002 79
ENST00000512790 CTC-487M23.8-004 processed_transcript Homo_sapiens 0.000000000002 79
ENST00000515463 SRP19-008 protein_coding Homo_sapiens 0 481
ENST00000515755 SRP19-003 retained_intron Homo_sapiens 0.0000000000007 79
ENST00000621420 SRP19-201 protein_coding Homo_sapiens 0 324

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