C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000424153} | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000506997  |
CTC-487M23.8-001 |
ENSG00000272869 |
9606 | + |
5:112861295-112892951  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0004UN | CIL_0004UN_0001 | CGP | 5:112861188-112922539 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0006614 | IEA | SRP-dependent cotranslational protein targeting to membrane |
| GO:0008312 | IEA | 7S RNA binding |
| GO:0048500 | IEA | signal recognition particle |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000112289
|
Zrsr2-001 | protein_coding | Mus_musculus | 0 | 1066 |
|
ENSMUST00000049506
|
Zrsr1-001 | protein_coding | Mus_musculus | 0 | 928 |
|
ENSMUST00000132350
|
Zrsr2-008 | retained_intron | Mus_musculus | 0 | 621 |
|
ENSMUST00000057843
|
Commd1-001 | protein_coding | Mus_musculus | 0 | 244 |
|
ENSMUST00000142010
|
Srp19-003 | nonsense_mediated_decay | Mus_musculus | 8.00001e-41 | 172 |
|
ENSMUST00000119329
|
Srp19-006 | protein_coding | Mus_musculus | 8.00001e-41 | 172 |
|
ENSMUST00000072576
|
Srp19-001 | protein_coding | Mus_musculus | 8.00001e-41 | 172 |
|
ENSMUST00000140279
|
Srp19-002 | retained_intron | Mus_musculus | 8.00001e-41 | 172 |
|
ENSMUST00000131713
|
Srp19-005 | processed_transcript | Mus_musculus | 0.000000000002 | 79 |
|
ENSMUST00000124719
|
Zrsr2-006 | retained_intron | Mus_musculus | 4.2039e-45 | 185 |
