C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ADP-ribosylation factor GTPase activating protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000132627 Arfgap1-011 ENSMUSG00000027575 10090 + 2:180967279-180972929 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000132627
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000132627 51.128±0.00 40.137±0.00 35.257±0.00 20.824±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00045A CIL_00045A_0002 CGP 2:180934772-180982526
CIL_00045B CIL_00045B_0002 CGP 2:180967225-181017540

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000353546 ARFGAP1-003 protein_coding Homo_sapiens 0 553
ENST00000370275 ARFGAP1-004 protein_coding Homo_sapiens 0 553
ENST00000370283 ARFGAP1-001 protein_coding Homo_sapiens 0 553
ENST00000518601 ARFGAP1-016 protein_coding Homo_sapiens 0 320
ENST00000519273 ARFGAP1-201 protein_coding Homo_sapiens 0 457
ENST00000519531 ARFGAP1-014 retained_intron Homo_sapiens 0 553
ENST00000519604 ARFGAP1-202 protein_coding Homo_sapiens 0 320
ENST00000520485 ARFGAP1-008 nonsense_mediated_decay Homo_sapiens 0 457
ENST00000522403 ARFGAP1-015 protein_coding Homo_sapiens 0 547
ENST00000522959 ARFGAP1-011 retained_intron Homo_sapiens 0 460
ENST00000524192 ARFGAP1-013 retained_intron Homo_sapiens 0 553
ENST00000547204 ARFGAP1-007 protein_coding Homo_sapiens 0 320
ENST00000549047 ARFGAP1-021 protein_coding Homo_sapiens 0 320
ENST00000550188 ARFGAP1-006 protein_coding Homo_sapiens 0 464

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