C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ADP-ribosylation factor GTPase activating protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000522959 ARFGAP1-011 ENSG00000101199 9606 + 20:63272802-63276742 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonKidneyLiverOvaryPlacentaTestisENST00000522959
Transcript ID Bladder Brain Breast Colon Kidney Liver Ovary Placenta Testis
ENST00000522959 2.782±0.00 4.141±0.00 5.515±0.00 2.956±0.00 5.760±0.00 6.698±0.00 9.977±0.00 14.476±0.00 58.480±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00045A CIL_00045A_0001 CGP 20:63240784-63289793
CIL_00045B CIL_00045B_0001 CGP 20:63272785-63334851

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000185115 Arfgap1-009 protein_coding Mus_musculus 0 464
ENSMUST00000145629 Arfgap1-003 retained_intron Mus_musculus 0 464
ENSMUST00000132627 Arfgap1-011 retained_intron Mus_musculus 0 460
ENSMUST00000108860 Arfgap1-005 protein_coding Mus_musculus 0 460
ENSMUST00000108862 Arfgap1-002 protein_coding Mus_musculus 0 460
ENSMUST00000108859 Arfgap1-008 protein_coding Mus_musculus 0 457
ENSMUST00000108861 Arfgap1-006 protein_coding Mus_musculus 0 457
ENSMUST00000029092 Arfgap1-001 protein_coding Mus_musculus 0 457
ENSMUST00000184394 Arfgap1-010 protein_coding Mus_musculus 0 453
ENSMUST00000136590 Arfgap1-004 processed_transcript Mus_musculus 0 228

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