C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CCCTC-binding factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000132679 Ctcf-002 ENSMUSG00000005698 10090 + 8:105636568-105681647 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000132679
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000132679 1.828±0.32 2.466±0.44 3.561±0.00 4.967±0.00 1.977±0.20 3.782±0.90 1.749±0.10 3.067±0.72 3.862±1.64 3.811±0.59 4.058±1.90 5.528±2.32 1.262±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003LR CIL_0003LR_0003 CGP 8:105605229-105682922
CIL_0006LW CIL_0006LW_0003 CGP 8:105636568-105698178

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264010 CTCF-001 protein_coding Homo_sapiens 0 1666
ENST00000401394 CTCF-002 protein_coding Homo_sapiens 0 1949
ENST00000566078 CTCF-003 retained_intron Homo_sapiens 0 289

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