C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear receptor subfamily 1, group H, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000132769 Nr1h2-005 ENSMUSG00000060601 10090 - 7:44551057-44553951 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENSMUST00000132769
Transcript ID Placenta
ENSMUST00000132769 7.764±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004IL CIL_0004IL_0002 CGP 7:44549616-44586862

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000253727 NR1H2-001 protein_coding Homo_sapiens 0 241
ENST00000411902 NR1H2-003 protein_coding Homo_sapiens 0 241
ENST00000593532 NR1H2-010 nonsense_mediated_decay Homo_sapiens 0.0000000004 71
ENST00000593926 NR1H2-002 protein_coding Homo_sapiens 0 241
ENST00000595730 NR1H2-007 retained_intron Homo_sapiens 0.000000002 68
ENST00000597085 NR1H2-013 retained_intron Homo_sapiens 0 268
ENST00000597130 NR1H2-008 protein_coding Homo_sapiens 0.000001 58
ENST00000597790 NR1H2-006 protein_coding Homo_sapiens 0.000001 58
ENST00000598168 NR1H2-014 protein_coding Homo_sapiens 3e-21 108
ENST00000599105 NR1H2-005 protein_coding Homo_sapiens 0.0000000003 71

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