C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CREB3 regulatory factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000132972 Crebrf-005 ENSMUSG00000048249 10090 + 17:26742984-26758187 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryTestisENSMUST00000132972
Transcript ID Ovary Testis
ENSMUST00000132972 11.642±0.00 27.772±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008KN CIL_0008KN_0002 VISTA 17:26208852-26810691
CIL_000915 CIL_000915_0002 VISTA 17:26527896-27128643
CIL_0008HF CIL_0008HF_0002 VISTA 17:26563571-27166666
CIL_00023T CIL_00023T_0002 CGP 17:26676396-26776635
CIL_00023P CIL_00023P_0002 CGP 17:26715650-26792565

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296953 CREBRF-001 protein_coding Homo_sapiens 0 435
ENST00000520420 CREBRF-004 protein_coding Homo_sapiens 6.00036e-42 176
ENST00000520464 CREBRF-005 retained_intron Homo_sapiens 0 448
ENST00000522692 CREBRF-003 protein_coding Homo_sapiens 9.00054e-42 176

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